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» Quantifying Homology Classes
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DIS
2007
Springer
14 years 1 months ago
Unsupervised Spam Detection Based on String Alienness Measures
We propose an unsupervised method for detecting spam documents from Web page data, based on equivalence relations on strings. We propose 3 measures for quantifying the alienness (...
Kazuyuki Narisawa, Hideo Bannai, Kohei Hatano, Mas...
BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
14 years 2 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
CORR
2011
Springer
235views Education» more  CORR 2011»
13 years 2 months ago
On the accuracy of language trees
Historical linguistics aims at inferring the most likely language phylogenetic tree starting from information concerning the evolutionary relatedness of languages. The available i...
Simone Pompei, Vittorio Loreto, Francesca Tria
AAAI
2010
13 years 7 months ago
Fast Conditional Density Estimation for Quantitative Structure-Activity Relationships
Many methods for quantitative structure-activity relationships (QSARs) deliver point estimates only, without quantifying the uncertainty inherent in the prediction. One way to qua...
Fabian Buchwald, Tobias Girschick, Eibe Frank, Ste...
BMCBI
2008
189views more  BMCBI 2008»
13 years 7 months ago
AnEnPi: identification and annotation of analogous enzymes
Background: Enzymes are responsible for the catalysis of the biochemical reactions in metabolic pathways. Analogous enzymes are able to catalyze the same reactions, but they prese...
Thomas D. Otto, Ana Carolina R. Guimarães, ...