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PVLDB
2008
205views more  PVLDB 2008»
13 years 6 months ago
Making SENSE: socially enhanced search and exploration
Online communities like Flickr, del.icio.us and YouTube have established themselves as very popular and powerful services for publishing and searching contents, but also for ident...
Tom Crecelius, Mouna Kacimi, Sebastian Michel, Tho...
SIGMOD
2011
ACM
250views Database» more  SIGMOD 2011»
12 years 10 months ago
Hybrid in-database inference for declarative information extraction
In the database community, work on information extraction (IE) has centered on two themes: how to effectively manage IE tasks, and how to manage the uncertainties that arise in th...
Daisy Zhe Wang, Michael J. Franklin, Minos N. Garo...
BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich
BMCBI
2005
306views more  BMCBI 2005»
13 years 7 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
3DPVT
2002
IEEE
121views Visualization» more  3DPVT 2002»
14 years 9 days ago
Analysis of Secondary Structure Elements of Proteins Using Indexing Techniques
In this paper we present a method for protein structure comparison that is based on indexing. Unlike most methods using indexing, ours does not use invariants of the C atoms of th...
Concettina Guerra, Stefano Lonardi, Giuseppe Zanot...