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» Querying Protein-Protein Interaction Networks
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IJBRA
2007
88views more  IJBRA 2007»
13 years 7 months ago
Finding molecular complexes through multiple layer clustering of protein interaction networks
: Clustering protein-protein interaction networks (PINs) helps to identify complexes that guide the cell machinery. Clustering algorithms often create a flat clustering, without co...
Bill Andreopoulos, Aijun An, Xiangji Huang, Xiaoga...
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces
Background: Currently there is a strong need for methods that help to obtain an accurate description of protein interfaces in order to be able to understand the principles that go...
Joan Teyra, Andreas Doms, Michael Schroeder, M. Te...
BMCBI
2005
253views more  BMCBI 2005»
13 years 7 months ago
The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
Background: This paper describes an automated method for finding clusters of interconnected proteins in protein interaction networks and retrieving protein annotations associated ...
Ruth Dunn, Frank Dudbridge, Christopher M. Sanders...
ICPR
2008
IEEE
14 years 2 months ago
Detecting hubs and quasi cliques in scale-free networks
Scale-free networks are believed to closely model most real-world networks. An interesting property of such networks is the existence of so-called hub and community structures. In...
Sriganesh Srihari, Hoong Kee Ng, Kang Ning, Hon Wa...
BIRD
2008
Springer
163views Bioinformatics» more  BIRD 2008»
13 years 9 months ago
Multi-functional Protein Clustering in PPI Networks
Abstract. Protein-Protein Interaction (PPI) networks contain valuable information for the isolation of groups of proteins that participate in the same biological function. Many pro...
Clara Pizzuti, Simona E. Rombo