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BMCBI
2005
136views more  BMCBI 2005»
15 years 4 months ago
Automatic detection of false annotations via binary property clustering
Background: Computational protein annotation methods occasionally introduce errors. Falsepositive (FP) errors are annotations that are mistakenly associated with a protein. Such f...
Noam Kaplan, Michal Linial
BIBE
2007
IEEE
142views Bioinformatics» more  BIBE 2007»
15 years 10 months ago
An HV-SVM Classifier to Infer TF-TF Interactions Using Protein Domains and GO Annotations
—Interactions between transcription factors (TFs) are necessary for deciphering the complex mechanisms of transcription regulation in eukaryotes. In this paper, we proposed a nov...
Xiaoli Li, Jun-Xiang Lee, Bharadwaj Veeravalli, Se...
NAR
2010
107views more  NAR 2010»
14 years 11 months ago
FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database
FlyTF (http://www.flytf.org) is a database of computationally predicted and/or experimentally verified site-specific transcription factors (TFs) in the fruit fly Drosophila melano...
Ulrike Pfreundt, Daniel P. James, Susan Tweedie, D...
ICCV
2009
IEEE
16 years 9 months ago
TagProp: Discriminative Metric Learning in Nearest Neighbor Models for Image Auto-Annotation
Image auto-annotation is an important open problem in computer vision. For this task we propose TagProp, a discriminatively trained nearest neighbor model. Tags of test images a...
Matthieu Guillaumin, Thomas Mensink, Jakob Verbeek...
BIOINFORMATICS
2007
74views more  BIOINFORMATICS 2007»
15 years 4 months ago
Simultaneous alignment and annotation of cis-regulatory regions
Genomic transcriptional processes rely heavily on the combinatorial binding of transcription factors on the upstream regions of genes. Analysis and complete characterization of su...
Abha Singh Bais, Steffen Grossmann, Martin Vingron