134 search results - page 9 / 27 » RNA Secondary Structure Prediction with Simple Pseudoknots |
RECOMB
2005
Springer
14 years 7 months ago
2005
Springer
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
BMCBI
2010
13 years 7 months ago
2010
Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...
JCB
2000
13 years 7 months ago
2000
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
BMCBI
2005
13 years 7 months ago
2005
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
RECOMB
2009
Springer
14 years 8 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...