28 search results - page 3 / 6 » RNAalifold: improved consensus structure prediction for RNA ... |
BMCBI
2006
13 years 7 months ago
2006
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
WABI
2005
Springer
14 years 1 months ago
2005
Springer
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
BMCBI
2008
13 years 7 months ago
2008
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
RECOMB
2009
Springer
14 years 8 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
BMCBI
2011
13 years 2 months ago
2011
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...