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    ALMOB
    2006
    135views more  ALMOB 2006»
    P-value based visualization of codon usage data
    13 years 7 months ago
    P-value based visualization of codon usage data
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    Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the prediction of gene expression levels. Both ...
    Peter Meinicke, Thomas Brodag, Wolfgang Florian Fr...
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    BMCBI
    2007
    112views more  BMCBI 2007»
    Selecting dissimilar genes for multi-class classification, an application in cancer subtyping
    13 years 7 months ago
    Selecting dissimilar genes for multi-class classification, an application in cancer subtyping
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    Background: Gene expression microarray is a powerful technology for genetic profiling diseases and their associated treatments. Such a process involves a key step of biomarker ide...
    Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipou...
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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    13 years 7 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
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    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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    ALMOB
    2008
    160views more  ALMOB 2008»
    Syntenator: Multiple gene order alignments with a gene-specific scoring function
    13 years 7 months ago
    Syntenator: Multiple gene order alignments with a gene-specific scoring function
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    Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
    Christian Rödelsperger, Christoph Dieterich
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    BMCBI
    2011
    191views Artificial Intelligence» more  BMCBI 2011»
    SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
    12 years 11 months ago
    SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
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    Background: The popularity of massively parallel exome and transcriptome sequencing projects demands new data mining tools with a comprehensive set of features to support a wide r...
    Xutao Deng
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