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BMCBI
2007
91views more  BMCBI 2007»
13 years 7 months ago
A mass accuracy sensitive probability based scoring algorithm for database searching of tandem mass spectrometry data
Background: Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) has become one of the most used tools in mass spectrometry based proteomics. Various algorithms ...
Hua Xu, Michael A. Freitas
BMCBI
2008
133views more  BMCBI 2008»
13 years 7 months ago
CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated
Background: The identification of transcription factor binding sites is difficult since they are only a small number of nucleotides in size, resulting in large numbers of false po...
Matthew S. Hestand, Michiel van Galen, Michel P. V...
IR
2007
13 years 7 months ago
Lightweight natural language text compression
Variants of Huffman codes where words are taken as the source symbols are currently the most attractive choices to compress natural language text databases. In particular, Tagged...
Nieves R. Brisaboa, Antonio Fariña, Gonzalo...
JAIR
2007
132views more  JAIR 2007»
13 years 7 months ago
New Inference Rules for Max-SAT
Exact Max-SAT solvers, compared with SAT solvers, apply little inference at each node of the proof tree. Commonly used SAT inference rules like unit propagation produce a simpliï¬...
Chu Min Li, Felip Manyà, Jordi Planes
BMCBI
2005
103views more  BMCBI 2005»
13 years 7 months ago
SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms
Background: This paper describes SeqDoC, a simple, web-based tool to carry out direct comparison of ABI sequence chromatograms. This allows the rapid identification of single nucl...
Mark L. Crowe