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BMCBI
2010
153views more  BMCBI 2010»
13 years 7 months ago
MimoSA: a system for minimotif annotation
Background: Minimotifs are short peptide sequences within one protein, which are recognized by other proteins or molecules. While there are now several minimotif databases, they a...
Jay Vyas, Ronald J. Nowling, Thomas Meusburger, Da...
BMCBI
2010
128views more  BMCBI 2010»
13 years 7 months ago
Conserved residue clusters at protein-protein interfaces and their use in binding site identification
Background: Biological evolution conserves protein residues that are important for structure and function. Both protein stability and function often require a certain degree of st...
Mainak Guharoy, Pinak Chakrabarti
BMCBI
2008
144views more  BMCBI 2008»
13 years 7 months ago
PDTD: a web-accessible protein database for drug target identification
Background: Target identification is important for modern drug discovery. With the advances in the development of molecular docking, potential binding proteins may be discovered b...
Zhenting Gao, Honglin Li, Hailei Zhang, Xiaofeng L...
ML
2008
ACM
248views Machine Learning» more  ML 2008»
13 years 7 months ago
Feature selection via sensitivity analysis of SVM probabilistic outputs
Feature selection is an important aspect of solving data-mining and machine-learning problems. This paper proposes a feature-selection method for the Support Vector Machine (SVM) l...
Kai Quan Shen, Chong Jin Ong, Xiao Ping Li, Einar ...
COMPGEOM
2011
ACM
12 years 11 months ago
Reeb graphs: approximation and persistence
Given a continuous function f : X → IR on a topological space X, its level set f−1 (a) changes continuously as the real value a changes. Consequently, the connected components...
Tamal K. Dey, Yusu Wang