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SPAA
2010
ACM
14 years 1 months ago
TLRW: return of the read-write lock
TL2 and similar STM algorithms deliver high scalability based on write-locking and invisible readers. In fact, no modern STM design locks to read along its common execution path b...
David Dice, Nir Shavit
BMCBI
2007
159views more  BMCBI 2007»
13 years 9 months ago
Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype
Background: A finite state machine manipulating information-carrying DNA strands can be used to perform autonomous molecular-scale computations at the cellular level. Results: We ...
Israel Mark Martínez-Pérez, Gong Zha...
BMCBI
2005
126views more  BMCBI 2005»
13 years 9 months ago
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
Robert G. Beiko, Robert L. Charlebois
BMCBI
2008
116views more  BMCBI 2008»
13 years 9 months ago
Algorithm of OMA for large-scale orthology inference
Since the publication of our article (Roth, Gonnet, and Dessimoz: BMC Bioinformatics 2008 9: 518), we have noticed several errors, which we correct in the following. Correction We...
Alexander C. J. Roth, Gaston H. Gonnet, Christophe...
ESA
2004
Springer
117views Algorithms» more  ESA 2004»
14 years 2 months ago
Classroom Examples of Robustness Problems in Geometric Computations
The algorithms of computational geometry are designed for a machine model with exact real arithmetic. Substituting floating-point arithmetic for the assumed real arithmetic may c...
Lutz Kettner, Kurt Mehlhorn, Sylvain Pion, Stefan ...