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» Reasoning About Method Calls in Interface Specifications
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CIKM
2008
Springer
13 years 10 months ago
Modeling hidden topics on document manifold
Topic modeling has been a key problem for document analysis. One of the canonical approaches for topic modeling is Probabilistic Latent Semantic Indexing, which maximizes the join...
Deng Cai, Qiaozhu Mei, Jiawei Han, Chengxiang Zhai
BMCBI
2010
127views more  BMCBI 2010»
13 years 8 months ago
Deriving enzymatic and taxonomic signatures of metagenomes from short read data
Background: We propose a method for deriving enzymatic signatures from short read metagenomic data of unknown species. The short read data are converted to six pseudo-peptide cand...
Uri Weingart, Erez Persi, Uri Gophna, David Horn
BMCBI
2007
165views more  BMCBI 2007»
13 years 8 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf
FMICS
2007
Springer
14 years 2 months ago
An Approach to Formalization and Analysis of Message Passing Libraries
Message passing using libraries implementing the Message Passing Interface (MPI) standard is the dominant communication mechanism in high performance computing (HPC) applications. ...
Robert Palmer, Michael Delisi, Ganesh Gopalakrishn...
TLDI
2009
ACM
155views Formal Methods» more  TLDI 2009»
14 years 5 months ago
Opis: reliable distributed systems in OCaml
The importance of distributed systems is growing as computing devices become ubiquitous and bandwidth becomes plentiful. Concurrency and distribution pose algorithmic and implemen...
Pierre-Évariste Dagand, Dejan Kostic, Vikto...