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BMCBI
2008
124views more  BMCBI 2008»
13 years 7 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
ALMOB
2006
138views more  ALMOB 2006»
13 years 7 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
JMLR
2010
155views more  JMLR 2010»
13 years 2 months ago
Structured Sparse Principal Component Analysis
We present an extension of sparse PCA, or sparse dictionary learning, where the sparsity patterns of all dictionary elements are structured and constrained to belong to a prespeci...
Rodolphe Jenatton, Guillaume Obozinski, Francis Ba...
SSPR
2004
Springer
14 years 28 days ago
On Extending Symmetry Sets for 2D Shapes
Many attempts have been made to represent families of 2D shapes in a simpler way. These approaches lead to so-called structures as the Symmetry Set (SS) and a subset of it, the Med...
Arjan Kuijper, Ole Fogh Olsen
ISBI
2002
IEEE
14 years 8 months ago
Image content-based retrieval and automated interpretation of fluorescence microscope images via the protein subcellular locatio
We describe the Protein Subcellular Location Image Database (PSLID), which collects and structures 2-D through 5-D fluorescence microscope images, annotations, and derived feature...
Kai Huang, Jennifer Lin, James A. Gajnak, Robert F...