49 search results - page 5 / 10 » Reconfigurable Computing for Accelerating Protein Folding Si... |
IMR
2003
Springer
14 years 1 months ago
2003
Springer
The quality of numerical simulations of processes that are modeled by partial differential equations strongly depends on the quality of the mesh that is used for their discretiza...
ERSA
2004
13 years 9 months ago
2004
Abstract-- Technological advances have made FPGAs an attractive platform for the acceleration of complex scientific applications. These applications demand high performance and hig...
TCBB
2008
13 years 7 months ago
2008
When accounting for structural fluctuations or measurement errors, a single rigid structure may not be sufficient to represent a protein. One approach to solve this problem is to r...
BIBE
2007
IEEE
13 years 9 months ago
2007
IEEE
In this paper we describe our design and characterization of a co-processor architecture to accelerate median-based phylogenetic reconstruction for generearrangement data. Our curr...
ICPP
2006
IEEE
14 years 1 months ago
2006
IEEE
— This paper presents Salsa, a novel, decentralized and asynchronous realization of the “replica exchange” algorithm for simulating the structure, function, folding, and dyna...