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» Reconfigurable Molecular Dynamics Simulator
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IPPS
2008
IEEE
14 years 4 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
IPPS
2007
IEEE
14 years 4 months ago
Novel Broadcast/Multicast Protocols for Dynamic Sensor Networks
: In this paper, we have proposed a time efficient, energy saving and robust broadcast/multicast protocol for reconfigurable cluster-based sensor network. In our broadcast protocol...
Wei Chen, Islam A. K. M. Muzahidul, Mohan Malkani,...
ICCS
2007
Springer
14 years 4 months ago
A Multiscale, Cell-Based Framework for Modeling Cancer Development
We use a systems approach to develop a predictive model that medical researchers can use to study and treat cancerous tumors. Our multiscale, cell-based model includes intracellula...
Yi Jiang
HPDC
2000
IEEE
14 years 2 months ago
CAVEStudy: An Infrastructure for Computational Steering in Virtual Reality Environments
We present the CAVEStudy system that enables scientists to interactively steer a simulation from a virtual reality (VR) environment. No modification to the source code is necessa...
Luc Renambot, Henri E. Bal, Desmond Germans, Hans ...
BMCBI
2005
92views more  BMCBI 2005»
13 years 9 months ago
A decoy set for the thermostable subdomain from chicken villin headpiece, comparison of different free energy estimators
Background: Estimators of free energies are routinely used to judge the quality of protein structural models. As these estimators still present inaccuracies, they are frequently e...
Federico Fogolari, Silvio C. E. Tosatto, Giorgio C...