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» Reconstructing Numbers from Pairwise Function Values
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RECOMB
2003
Springer
14 years 9 months ago
An integrated probabilistic model for functional prediction of proteins
We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
Minghua Deng, Ting Chen, Fengzhu Sun
ICFP
2007
ACM
14 years 8 months ago
Stream fusion: from lists to streams to nothing at all
This paper presents an automatic deforestation system, stream fusion, based on equational transformations, that fuses a wider range of functions than existing short-cut fusion sys...
Duncan Coutts, Roman Leshchinskiy, Don Stewart
RECOMB
2009
Springer
14 years 9 months ago
How Many Bootstrap Replicates Are Necessary?
Phylogenetic Bootstrapping (BS) is a standard technique for inferring confidence values on phylogenetic trees that is based on reconstructing many trees from minor variations of th...
Nicholas D. Pattengale, Masoud Alipour, Olaf R. P....
CIDM
2007
IEEE
14 years 18 days ago
An Efficient Distance Calculation Method for Uncertain Objects
Recently the academic communities have paid more attention to the queries and mining on uncertain data. In the tasks such as clustering or nearest-neighbor queries, expected distan...
Lurong Xiao, Edward Hung
BMCBI
2008
122views more  BMCBI 2008»
13 years 8 months ago
Reconstructing networks of pathways via significance analysis of their intersections
Background: Significance analysis at single gene level may suffer from the limited number of samples and experimental noise that can severely limit the power of the chosen statist...
Mirko Francesconi, Daniel Remondini, Nicola Nerett...