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» Reconstructing networks using co-temporal functions
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BMCBI
2005
178views more  BMCBI 2005»
13 years 7 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
INFOCOM
2006
IEEE
14 years 1 months ago
Reverse Hashing for High-Speed Network Monitoring: Algorithms, Evaluation, and Applications
— A key function for network traffic monitoring and analysis is the ability to perform aggregate queries over multiple data streams. Change detection is an important primitive w...
Robert T. Schweller, Zhichun Li, Yan Chen, Yan Gao...
BMCBI
2007
151views more  BMCBI 2007»
13 years 7 months ago
A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microar
Background: The incorporation of prior biological knowledge in the analysis of microarray data has become important in the reconstruction of transcription regulatory networks in a...
Peter Larsen, Eyad Almasri, Guanrao Chen, Yang Dai
BMCBI
2010
115views more  BMCBI 2010»
13 years 7 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
ICASSP
2011
IEEE
12 years 11 months ago
A classifier-based decoding approach for large scale distributed coding
Canonical distributed quantization schemes do not scale to large sensor networks due to the exponential decoder storage complexity that they entail. Prior efforts to tackle this i...
Kumar Viswanatha, Sharadh Ramaswamy, Ankur Saxena,...