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» Reconstructing the Topology of Protein Complexes
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BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
BMCBI
2004
151views more  BMCBI 2004»
13 years 7 months ago
A computational approach for ordering signal transduction pathway components from genomics and proteomics Data
Background: Signal transduction is one of the most important biological processes by which cells convert an external signal into a response. Novel computational approaches to mapp...
Yin Liu, Hongyu Zhao
BMCBI
2002
214views more  BMCBI 2002»
13 years 7 months ago
Automated modelling of signal transduction networks
Background: Intracellular signal transduction is achieved by networks of proteins and small molecules that transmit information from the cell surface to the nucleus, where they ul...
Martin Steffen, Allegra Petti, John Aach, Patrik D...
OTM
2007
Springer
14 years 1 months ago
Self-healing in Binomial Graph Networks
The number of processors embedded in high performance computing platforms is growing daily to solve larger and more complex problems. However, as the number of components increases...
Thara Angskun, George Bosilca, Jack Dongarra
FOCS
2007
IEEE
13 years 11 months ago
Inferring Local Homology from Sampled Stratified Spaces
We study the reconstruction of a stratified space from a possibly noisy point sample. Specifically, we use the vineyard of the distance function restricted to a 1-parameter family...
Paul Bendich, David Cohen-Steiner, Herbert Edelsbr...