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BMCBI
2010
113views more  BMCBI 2010»
13 years 9 months ago
A classification model for distinguishing copy number variants from cancer-related alterations
Background: Both somatic copy number alterations (CNAs) and germline copy number variants (CNVs) that are prevalent in healthy individuals can appear as recurrent changes in compa...
Irina Ostrovnaya, Gouri Nanjangud, Adam B. Olshen
BMCBI
2011
13 years 4 months ago
The dChip survival analysis module for microarray data
Background: Genome-wide expression signatures are emerging as potential marker for overall survival and disease recurrence risk as evidenced by recent commercialization of gene ex...
Samir B. Amin, Parantu K. Shah, Aimin Yan, Sophia ...
RECOMB
2007
Springer
14 years 10 months ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
SIGIR
2009
ACM
14 years 4 months ago
Global ranking by exploiting user clicks
It is now widely recognized that user interactions with search results can provide substantial relevance information on the documents displayed in the search results. In this pape...
Shihao Ji, Ke Zhou, Ciya Liao, Zhaohui Zheng, Gui-...
CINQ
2004
Springer
189views Database» more  CINQ 2004»
14 years 3 months ago
Employing Inductive Databases in Concrete Applications
In this paper we present the application of the inductive database approach to two practical analytical case studies: Web usage mining in Web logs and financial data. As far as co...
Rosa Meo, Pier Luca Lanzi, Maristella Matera, Dani...