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KCAP
2011
ACM
12 years 10 months ago
Let's agree to disagree: on the evaluation of vocabulary alignment
Gold standard mappings created by experts are at the core of alignment evaluation. At the same time, the process of manual evaluation is rarely discussed. While the practice of ha...
Anna Tordai, Jacco van Ossenbruggen, Guus Schreibe...
NAR
2011
214views Computer Vision» more  NAR 2011»
12 years 10 months ago
starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
MicroRNAs (miRNAs) represent an important class of small non-coding RNAs (sRNAs) that regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to their regu...
Jian-Hua Yang, Jun-Hao Li, Peng Shao, Hui Zhou, Yu...
NAR
2011
234views Computer Vision» more  NAR 2011»
12 years 10 months ago
The UCSC cancer genomics browser: update 2011
The UCSC Cancer Genomics Browser (https:// genome-cancer.ucsc.edu) comprises a suite of web-based tools to integrate, visualize and analyze cancer genomics and clinical data. The ...
J. Zachary Sanborn, Stephen C. Benz, Brian Craft, ...
NAR
2011
248views Computer Vision» more  NAR 2011»
12 years 10 months ago
NCBI GEO: archive for functional genomics data sets - 10 years on
A decade ago, the Gene Expression Omnibus (GEO) database was established at the National Center for Biotechnology Information (NCBI). The original objective of GEO was to serve as...
Tanya Barrett, Dennis B. Troup, Stephen E. Wilhite...
PLDI
2011
ACM
12 years 10 months ago
Automated atomicity-violation fixing
Fixing software bugs has always been an important and timeconsuming process in software development. Fixing concurrency bugs has become especially critical in the multicore era. H...
Guoliang Jin, Linhai Song, Wei Zhang, Shan Lu, Ben...