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BMCBI
2007
106views more  BMCBI 2007»
13 years 8 months ago
Simultaneous identification of long similar substrings in large sets of sequences
Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
Jürgen Kleffe, Friedrich Möller, Burghar...
ICASSP
2008
IEEE
14 years 2 months ago
Deformable trellis: open contour tracking in bio-image sequences
This paper presents an open contour tracking method that employs an arc-emission Hidden Markov Model (HMM). The algorithm encodes the shape information of the structure in a spati...
Mehmet Emre Sargin, Alphan Altinok, Kenneth Rose, ...
CADE
2002
Springer
14 years 8 months ago
Lazy Theorem Proving for Bounded Model Checking over Infinite Domains
Abstract. We investigate the combination of propositional SAT checkers with domain-specific theorem provers as a foundation for bounded model checking over infinite domains. Given ...
Harald Rueß, Leonardo Mendonça de Mou...
SPIN
2004
Springer
14 years 1 months ago
Directed Error Detection in C++ with the Assembly-Level Model Checker StEAM
Most approaches for model checking software are based on ration of abstract models from source code, which may greatly reduce the search space, but may also introduce errors that a...
Peter Leven, Tilman Mehler, Stefan Edelkamp
CACM
2011
120views more  CACM 2011»
13 years 3 months ago
The sequence memoizer
We propose an unbounded-depth, hierarchical, Bayesian nonparametric model for discrete sequence data. This model can be estimated from a single training sequence, yet shares stati...
Frank Wood, Jan Gasthaus, Cédric Archambeau...