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BMCBI
2010
104views more  BMCBI 2010»
13 years 10 months ago
A method for automatically extracting infectious disease-related primers and probes from the literature
Background: Primer and probe sequences are the main components of nucleic acid-based detection systems. Biologists use primers and probes for different tasks, some related to the ...
Miguel García-Remesal, Alejandro Cuevas, Vi...
BMCBI
2005
189views more  BMCBI 2005»
13 years 10 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
IJCAI
2003
13 years 11 months ago
Bayesian Information Extraction Network
Dynamic Bayesian networks (DBNs) offer an elegant way to integrate various aspects of language in one model. Many existing algorithms developed for learning and inference in DBNs ...
Leonid Peshkin, Avi Pfeffer
BMCBI
2007
168views more  BMCBI 2007»
13 years 10 months ago
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks
Background: Uncovering cellular roles of a protein is a task of tremendous importance and complexity that requires dedicated experimental work as well as often sophisticated data ...
Nikolai Daraselia, Anton Yuryev, Sergei Egorov, Il...
SEMCO
2009
IEEE
14 years 4 months ago
LexPar: A Freely Available English Paraphrase Lexicon Automatically Extracted from FrameNet
—This is a paper about a new resource, namely an English paraphrase dictionary extracted from the FrameNet lexicon and its example data base. I. THE LEXPAR PARAPHRASE DICTIONARY ...
Bob Coyne, Owen Rambow