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IJCAI
1989
13 years 8 months ago
Stochastic Analysis of Qualitative Dynamics
We extend qualitative reasoning with estimations of the relative likelihoods of the pos sible qualitative behaviors . We estimate the likelihoods by viewing the dynamics o f a sys...
Jon Doyle, Elisha Sacks
BMCBI
2010
100views more  BMCBI 2010»
13 years 7 months ago
Trimming of mammalian transcriptional networks using network component analysis
Background: Network Component Analysis (NCA) has been used to deduce the activities of transcription factors (TFs) from gene expression data and the TF-gene binding relationship. ...
Linh M. Tran, Daniel R. Hyduke, James C. Liao
BMCBI
2010
124views more  BMCBI 2010»
13 years 7 months ago
Comparative analysis of acute and chronic corticosteroid pharmacogenomic effects in rat liver: Transcriptional dynamics and regu
Background: Comprehensively understanding corticosteroid pharmacogenomic effects is an essential step towards an insight into the underlying molecular mechanisms for both benefici...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
BMCBI
2006
117views more  BMCBI 2006»
13 years 7 months ago
The Cluster Variation Method for Efficient Linkage Analysis on Extended Pedigrees
Background: Computing exact multipoint LOD scores for extended pedigrees rapidly becomes infeasible as the number of markers and untyped individuals increase. When markers are exc...
Cornelis A. Albers, Martijn A. R. Leisink, Hilbert...
MCS
2008
Springer
13 years 7 months ago
Error analysis of a stochastic immersed boundary method incorporating thermal fluctuations
A stochastic numerical scheme for an extended immersed boundary method which incorporates thermal fluctuations for the simulation of microscopic biological systems consisting of fl...
Paul J. Atzberger, Peter R. Kramer