77 search results - page 3 / 16 » Representation for Discovery of Protein Motifs |
NAR
2007
13 years 7 months ago
2007
Short, linear motifs (SLiMs) play a critical role in many biological processes, particularly in protein–protein interactions. Overrepresentation of convergent occurrences of mot...
BMCBI
2010
13 years 2 months ago
2010
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
ICML
2005
IEEE
14 years 8 months ago
2005
IEEE
We present new, general-purpose kernels for protein structure analysis, and describe how to apply them to structural motif discovery and function classification. Experiments show ...
BMCBI
2007
13 years 7 months ago
2007
Background: For many metalloproteins, sequence motifs characteristic of metal-binding sites have not been found or are so short that they would not be expected to be metal-specifi...
BMCBI
2007
13 years 7 months ago
2007
Background: Detection of short, subtle conserved motif regions within a set of related DNA or amino acid sequences can lead to discoveries about important regulatory domains such ...