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» Representations of Metabolic Knowledge
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149
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BMCBI
2010
191views more  BMCBI 2010»
15 years 4 months ago
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
Background: Genome-scale metabolic reconstructions under the Constraint Based Reconstruction and Analysis (COBRA) framework are valuable tools for analyzing the metabolic capabili...
Jan Schellenberger, Junyoung O. Park, Tom M. Conra...
145
Voted
IPPS
2002
IEEE
15 years 8 months ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
148
Voted
CORR
2006
Springer
118views Education» more  CORR 2006»
15 years 3 months ago
Integration and mining of malaria molecular, functional and pharmacological data: how far are we from a chemogenomic knowledge s
The organization and mining of malaria genomic and post-genomic data is important to significantly increase the knowledge of the biology of its causative agents, and is motivated,...
L.-M. Birkholtz, Olivier Bastien, G. Wells, D. Gra...
120
Voted
ISMB
1996
15 years 5 months ago
HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae
Peter D. Karp, Christos A. Ouzounis, Suzanne M. Pa...
BMCBI
2006
127views more  BMCBI 2006»
15 years 3 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...