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BMCBI
2010
143views more  BMCBI 2010»
13 years 10 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
EFDBS
2001
13 years 11 months ago
Evolving Hybrid Distributed Databases: Architecture and Methodology
Abstract. This paper focuses on the interoperability of autonomous legacy databases with the idea of meeting the future requirements of an organization. It describes a general arch...
Philippe Thiran, Jean-Luc Hainaut
LION
2009
Springer
114views Optimization» more  LION 2009»
14 years 4 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
CSB
2002
IEEE
230views Bioinformatics» more  CSB 2002»
14 years 3 months ago
Prediction of Protein Function Using Protein-Protein Interaction Data
Assigning functions to novel proteins is one of the most important problems in the post-genomic era. Several approaches have been applied to this problem, including analyzing gene...
Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, ...
BMCBI
2008
156views more  BMCBI 2008»
13 years 10 months ago
Chromhome: A rich internet application for accessing comparative chromosome homology maps
Background: Comparative genomics has become a significant research area in recent years, following the availability of a number of sequenced genomes. The comparison of genomes is ...
Sridevi Nagarajan, Willem Rens, James Stalker, Ton...