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» Results of the Ontology Alignment Evaluation Initiative 2007
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BMCBI
2006
121views more  BMCBI 2006»
13 years 6 months ago
Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using
Background: Availability of high-resolution RNA crystal structures for the 30S and 50S ribosomal subunits and the subsequent validation of comparative secondary structure models h...
Yadhu Kumar, Ralf Westram, Peter Kipfer, Harald Me...
BMCBI
2006
139views more  BMCBI 2006»
13 years 6 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BIOINFORMATICS
2007
161views more  BIOINFORMATICS 2007»
13 years 6 months ago
Functional evaluation of domain-domain interactions and human protein interaction networks
: Large amounts of protein and domain interaction data are being produced by experimental high-throughput techniques and computational approaches. To gain insight into the value of...
Andreas Schlicker, Carola Huthmacher, Fidel Ram&ia...
WEBI
2009
Springer
14 years 1 months ago
Social Semantics and Its Evaluation by Means of Semantic Relatedness and Open Topic Models
—This paper presents an approach using social semantics for the task of topic labelling by means of Open Topic Models. Our approach utilizes a social ontology to create an alignm...
Ulli Waltinger, Alexander Mehler
BMCBI
2007
140views more  BMCBI 2007»
13 years 6 months ago
Evaluation of high-throughput functional categorization of human disease genes
Background: Biological data that are well-organized by an ontology, such as Gene Ontology, enables high-throughput availability of the semantic web. It can also be used to facilit...
James L. Chen, Yang Liu, Lee T. Sam, Jianrong Li, ...