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» Rich probabilistic models for gene expression
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BMCBI
2007
127views more  BMCBI 2007»
13 years 7 months ago
A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments
Background: With the explosion in data generated using microarray technology by different investigators working on similar experiments, it is of interest to combine results across...
Hyungwon Choi, Ronglai Shen, Arul M. Chinnaiyan, D...
IJCAI
2001
13 years 9 months ago
IBAL: A Probabilistic Rational Programming Language
In a rational programming language, a program specifies a situation faced by an agent; evaluating the program amounts to computing what a rational agent would believe or do in the...
Avi Pfeffer
BMCBI
2011
12 years 11 months ago
RegNetB: Predicting Relevant Regulator-Gene Relationships in Localized Prostate Tumor Samples
Background: A central question in cancer biology is what changes cause a healthy cell to form a tumor. Gene expression data could provide insight into this question, but it is dif...
Angel Alvarez, Peter J. Woolf
BMCBI
2010
97views more  BMCBI 2010»
13 years 2 months ago
A semi-parametric Bayesian model for unsupervised differential co-expression analysis
Background: Differential co-expression analysis is an emerging strategy for characterizing disease related dysregulation of gene expression regulatory networks. Given pre-defined ...
Johannes M. Freudenberg, Siva Sivaganesan, Michael...
ACL
2012
11 years 10 months ago
Labeling Documents with Timestamps: Learning from their Time Expressions
Temporal reasoners for document understanding typically assume that a document’s creation date is known. Algorithms to ground relative time expressions and order events often re...
Nathanael Chambers