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BMCBI
2007
202views more  BMCBI 2007»
13 years 11 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
BMCBI
2007
140views more  BMCBI 2007»
13 years 11 months ago
Evaluation of high-throughput functional categorization of human disease genes
Background: Biological data that are well-organized by an ontology, such as Gene Ontology, enables high-throughput availability of the semantic web. It can also be used to facilit...
James L. Chen, Yang Liu, Lee T. Sam, Jianrong Li, ...
BMCBI
2007
198views more  BMCBI 2007»
13 years 11 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
IJHPCA
2008
131views more  IJHPCA 2008»
13 years 11 months ago
De Novo Ultrascale Atomistic Simulations On High-End Parallel Supercomputers
We present a de novo hierarchical simulation framework for first-principles based predictive simulations of materials and their validation on high-end parallel supercomputers and ...
Aiichiro Nakano, Rajiv K. Kalia, Ken-ichi Nomura, ...
ENGL
2007
101views more  ENGL 2007»
13 years 11 months ago
Multiresolution Knowledge Mining using Wavelet Transform
— Most research in Knowledge Mining deal with the basic models like clustering, classification, regression, association rule mining and so on. In the process of quest for knowled...
R. Pradeep Kumar, P. Nagabhushan
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