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    BMCBI
    2006
    131views more  BMCBI 2006»
    Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span
    13 years 8 months ago
    Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span
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    Background: The statistical modeling of biomedical corpora could yield integrated, coarse-to-fine views of biological phenomena that complement discoveries made from analysis of m...
    David M. Blei, K. Franks, Michael I. Jordan, I. Sa...
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    BMCBI
    2010
    109views more  BMCBI 2010»
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
    13 years 9 months ago
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
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    Background: In the last decade, biochemical studies have revealed that epigenetic modifications including histone modifications, histone variants and DNA methylation form a comple...
    Xiaojiang Xu, Stephen Hoang, Marty W. Mayo, Stefan...
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    BMCBI
    2008
    130views more  BMCBI 2008»
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
    13 years 9 months ago
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
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    Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
    Sheila Podell, Terry Gaasterland, Eric E. Allen
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    BMCBI
    2006
    151views more  BMCBI 2006»
    Modeling Sage data with a truncated gamma-Poisson model
    13 years 8 months ago
    Modeling Sage data with a truncated gamma-Poisson model
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    Background: Serial Analysis of Gene Expressions (SAGE) produces gene expression measurements on a discrete scale, due to the finite number of molecules in the sample. This means t...
    Helene H. Thygesen, Aeilko H. Zwinderman
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    BMCBI
    2010
    112views more  BMCBI 2010»
    PhenoFam-gene set enrichment analysis through protein structural information
    13 years 9 months ago
    PhenoFam-gene set enrichment analysis through protein structural information
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    Background: With the current technological advances in high-throughput biology, the necessity to develop tools that help to analyse the massive amount of data being generated is e...
    Maciej Paszkowski-Rogacz, Mikolaj Slabicki, M. Ter...
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