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JACM
2002
94views more  JACM 2002»
13 years 10 months ago
The greedy path-merging algorithm for contig scaffolding
Given a collection of contigs and mate-pairs. The Contig Scaffolding Problem is to order and orientate the given contigs in a manner that is consistent with as many mate-pairs as p...
Daniel H. Huson, Knut Reinert, Eugene W. Myers
COCO
1998
Springer
123views Algorithms» more  COCO 1998»
14 years 3 months ago
Isolation, Matching, and Counting
We show that the perfect matching problem is in the complexity class SPL in the nonuniform setting. This provides a better upper bound on the complexity of the matching problem, a...
Eric Allender, Klaus Reinhardt
JMLR
2012
12 years 1 months ago
Online Incremental Feature Learning with Denoising Autoencoders
While determining model complexity is an important problem in machine learning, many feature learning algorithms rely on cross-validation to choose an optimal number of features, ...
Guanyu Zhou, Kihyuk Sohn, Honglak Lee
ACL
1993
14 years 3 days ago
Principle-Based Parsing without Overgeneration
Overgeneration is the main source of computational complexity in previous principle-based parsers. This paper presents a message passing algorithm for principle-based parsing that...
Dekang Lin
ENC
2003
IEEE
14 years 4 months ago
Efficient Compression from Non-ergodic Sources with Genetic Algorithms
Several lossless data compression schemes have been proposed over the past years. Since Shannon developed information theory in his seminal paper, however, the problem of data com...
Angel Fernando Kuri Morales