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CASCON
2007
104views Education» more  CASCON 2007»
13 years 8 months ago
Identifying fault-prone files using static analysis alerts through singular value decomposition
Static analysis tools tend to generate more alerts than a development team can reasonably examine without some form of guidance. In this paper, we propose a technique for leveragi...
Mark Sherriff, Sarah Smith Heckman, Mike Lake, Lau...
BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
ICSE
2007
IEEE-ACM
14 years 7 months ago
Agile Methods: Crossing the Chasm
An armada of emerging agile methods of software development (with eXtreme Programming and Scrum being the most broadly used) is both gaining popularity and generating lots of cont...
Frank Maurer, Grigori Melnik
BMCBI
2007
163views more  BMCBI 2007»
13 years 7 months ago
Strainer: software for analysis of population variation in community genomic datasets
Background: Metagenomic analyses of microbial communities that are comprehensive enough to provide multiple samples of most loci in the genomes of the dominant organism types will...
John M. Eppley, Gene W. Tyson, Wayne M. Getz, Jill...
BMCBI
2010
115views more  BMCBI 2010»
13 years 7 months ago
CONAN: copy number variation analysis software for genome-wide association studies
Background: Genome-wide association studies (GWAS) based on single nucleotide polymorphisms (SNPs) revolutionized our perception of the genetic regulation of complex traits and di...
Lukas Forer, Sebastian Schönherr, Hansi Wei&s...