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BMCBI
2006
137views more  BMCBI 2006»
13 years 7 months ago
A maximum likelihood framework for protein design
Background: The aim of protein design is to predict amino-acid sequences compatible with a given target structure. Traditionally envisioned as a purely thermodynamic question, thi...
Claudia L. Kleinman, Nicolas Rodrigue, Céci...
INFOCOM
2011
IEEE
12 years 10 months ago
Strategyproof auctions for balancing social welfare and fairness in secondary spectrum markets
Abstract—Secondary spectrum access is emerging as a promising approach for mitigating the spectrum scarcity in wireless networks. Coordinated spectrum access for secondary users ...
Ajay Gopinathan, Zongpeng Li, Chuan Wu
VLDB
2007
ACM
155views Database» more  VLDB 2007»
14 years 7 months ago
Towards Graph Containment Search and Indexing
Given a set of model graphs D and a query graph q, containment search aims to find all model graphs g D such that q contains g (q g). Due to the wide adoption of graph models, f...
Chen Chen, Xifeng Yan, Philip S. Yu, Jiawei Han, D...
SDM
2008
SIAM
138views Data Mining» more  SDM 2008»
13 years 8 months ago
Learning Markov Network Structure using Few Independence Tests
In this paper we present the Dynamic Grow-Shrink Inference-based Markov network learning algorithm (abbreviated DGSIMN), which improves on GSIMN, the state-ofthe-art algorithm for...
Parichey Gandhi, Facundo Bromberg, Dimitris Margar...
BMCBI
2007
164views more  BMCBI 2007»
13 years 7 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason