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» Scalable Performance of the Panasas Parallel File System
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WAN
1998
Springer
15 years 7 months ago
Performance Analysis of Wavefront Algorithms on Very-Large Scale Distributed Systems
We present a model for the parallel performance of algorithms that consist of concurrent, two-dimensional wavefronts implemented in a message passing environment. The model combine...
Adolfy Hoisie, Olaf M. Lubeck, Harvey J. Wasserman
AINA
2008
IEEE
15 years 4 months ago
Communication Protocols and Message Formats for BLAST Parallelization on Cluster Systems
With the widespread use of BLAST, many parallel versions of BLAST on cluster systems are announced, but little work has been done for the parallel execution in the search for indi...
Hong-Soog Kim, Woo-Hyuk Jang, Dong-Soo Han
CCGRID
2005
IEEE
15 years 9 months ago
Semantic integration of file-based data for grid services
Data services for the Grid have focussed so far primarily on virtualising access to distributed databases, and encapsulating file location. However, orchestration of services requ...
Andrew Woolf, Ray Cramer, Marta Gutierrez, Kerstin...
IPPS
2002
IEEE
15 years 9 months ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
HPCA
2007
IEEE
16 years 4 months ago
A Scalable, Non-blocking Approach to Transactional Memory
Transactional Memory (TM) provides mechanisms that promise to simplify parallel programming by eliminating the need for locks and their associated problems (deadlock, livelock, pr...
Hassan Chafi, Jared Casper, Brian D. Carlstrom, Au...