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BMCBI
2007
154views more  BMCBI 2007»
13 years 7 months ago
PepBank - a database of peptides based on sequence text mining and public peptide data sources
Background: Peptides are important molecules with diverse biological functions and biomedical uses. To date, there does not exist a single, searchable archive for peptide sequence...
Timur Shtatland, Daniel Guettler, Misha Kossodo, M...
CORR
2008
Springer
116views Education» more  CORR 2008»
13 years 7 months ago
Learning to rank with combinatorial Hodge theory
Abstract. We propose a number of techniques for learning a global ranking from data that may be incomplete and imbalanced -- characteristics that are almost universal to modern dat...
Xiaoye Jiang, Lek-Heng Lim, Yuan Yao, Yinyu Ye
BMCBI
2006
103views more  BMCBI 2006»
13 years 7 months ago
Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
Background: The identification of differentially expressed genes (DEGs) from Affymetrix GeneChips arrays is currently done by first computing expression levels from the low-level ...
Sébastien Lemieux
JSA
2008
91views more  JSA 2008»
13 years 7 months ago
Using supplier locality in power-aware interconnects and caches in chip multiprocessors
Conventional snoopy-based chip multiprocessors take an aggressive approach broadcasting snoop requests to all nodes. In addition each node checks all received requests. This appro...
Ehsan Atoofian, Amirali Baniasadi
PR
2006
83views more  PR 2006»
13 years 7 months ago
Optimal convex error estimators for classification
A cross-validation error estimator is obtained by repeatedly leaving out some data points, deriving classifiers on the remaining points, computing errors for these classifiers on ...
Chao Sima, Edward R. Dougherty