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BMCBI
2011
13 years 2 months ago
Dissecting protein loops with a statistical scalpel suggests a functional implication of some structural motifs
Background: One of the strategies for protein function annotation is to search particular structural motifs that are known to be shared by proteins with a given function. Results:...
Leslie Regad, Juliette Martin, Anne-Claude Camprou...
JCC
2011
154views more  JCC 2011»
13 years 1 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
KDD
2009
ACM
204views Data Mining» more  KDD 2009»
14 years 11 months ago
Improving classification accuracy using automatically extracted training data
Classification is a core task in knowledge discovery and data mining, and there has been substantial research effort in developing sophisticated classification models. In a parall...
Ariel Fuxman, Anitha Kannan, Andrew B. Goldberg, R...
FUN
2010
Springer
312views Algorithms» more  FUN 2010»
14 years 3 months ago
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Given a string s, the Parikh vector of s, denoted p(s), counts the multiplicity of each character in s. Searching for a match of Parikh vector q (a “jumbled string”) in the tex...
Peter Burcsi, Ferdinando Cicalese, Gabriele Fici, ...
SIAMCOMP
2002
138views more  SIAMCOMP 2002»
13 years 10 months ago
Phase Change of Limit Laws in the Quicksort Recurrence under Varying Toll Functions
We characterize all limit laws of the quicksort type random variables defined recursively by Xn d = XIn + X n-1-In + Tn when the "toll function" Tn varies and satisfies ...
Hsien-Kuei Hwang, Ralph Neininger