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» Searching Protein 3-D Structures in Linear Time
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BMCBI
2008
101views more  BMCBI 2008»
13 years 7 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...
COMPLEXITY
2007
116views more  COMPLEXITY 2007»
13 years 7 months ago
Life, information, entropy, and time: Vehicles for semantic inheritance
abstractions provides an additional supra-phenotypic vehicle for semantic inheritance, which supports the cultural heritages around which civilizations revolve. The following three...
Antony R. Crofts
WEA
2009
Springer
126views Algorithms» more  WEA 2009»
14 years 2 months ago
Computing Elevation Maxima by Searching the Gauss Sphere
The elevation function on a smoothly embedded 2-manifold in R3 reflects the multiscale topography of cavities and protrusions as local maxima. The function has been useful in iden...
Bei Wang, Herbert Edelsbrunner, Dmitriy Morozov
IPPS
2007
IEEE
14 years 1 months ago
RNAVLab: A unified environment for computational RNA structure analysis based on grid computing technology
Ribonucleic acid (RNA) molecules play important roles in many biological processes including gene expression and regulation. An RNA molecule is a linear polymer which folds back o...
Michela Taufer, Ming-Ying Leung, Kyle L. Johnson, ...
STOC
2003
ACM
178views Algorithms» more  STOC 2003»
14 years 8 months ago
Uniform hashing in constant time and linear space
Many algorithms and data structures employing hashing have been analyzed under the uniform hashing assumption, i.e., the assumption that hash functions behave like truly random fu...
Anna Östlin, Rasmus Pagh