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ANTSW
2008
Springer
13 years 9 months ago
Integration of ACO in a Constraint Programming Language
We propose to integrate ACO in a Constraint Programming (CP) language. Basically, we use the CP language to describe the problem to solve by means of constraints and we use the CP ...
Madjid Khichane, Patrick Albert, Christine Solnon
ESWS
2008
Springer
13 years 9 months ago
Q2Semantic: A Lightweight Keyword Interface to Semantic Search
The increasing amount of data on the Semantic Web offers opportunities for semantic search. However, formal query hinders the casual users in expressing their information need as t...
Haofen Wang, Kang Zhang, Qiaoling Liu, Thanh Tran,...
IJBRA
2006
111views more  IJBRA 2006»
13 years 7 months ago
Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Co...
BMCBI
2004
125views more  BMCBI 2004»
13 years 7 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...
BIBE
2007
IEEE
138views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, We...