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BMCBI
2008
86views more  BMCBI 2008»
13 years 8 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
Ryung S. Kim, Hongkai Ji, Wing Hung Wong
CIARP
2009
Springer
14 years 2 months ago
Analysis of the GRNs Inference by Using Tsallis Entropy and a Feature Selection Approach
Abstract. An important problem in the bioinformatics field is to understand how genes are regulated and interact through gene networks. This knowledge can be helpful for many appl...
Fabrício Martins Lopes, Evaldo A. de Olivei...
CAINE
2008
13 years 9 months ago
Hierarchical Clustering of Features on Categorical Data of Biomedical Applications
Data mining became increasingly important in bioinformatics and biomedical area during last decade. Various data mining methods, such as association rule mining and clustering, ha...
Yi Lu, Lily R. Liang
KDD
1998
ACM
141views Data Mining» more  KDD 1998»
14 years 1 days ago
Rule Discovery from Time Series
We consider the problem of nding rules relating patterns in a time series to other patterns in that series, or patterns in one series to patterns in another series. A simple examp...
Gautam Das, King-Ip Lin, Heikki Mannila, Gopal Ren...