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» Semantic Mining and Analysis of Gene Expression Data
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BMCBI
2004
132views more  BMCBI 2004»
13 years 8 months ago
Two-stage normalization using background intensities in cDNA microarray data
Background: In the microarray experiment, many undesirable systematic variations are commonly observed. Normalization is the process of removing such variation that affects the me...
Dankyu Yoon, Sung-Gon Yi, Ju-Han Kim, Taesung Park
ICDM
2009
IEEE
98views Data Mining» more  ICDM 2009»
14 years 3 months ago
Topic Distributions over Links on Web
—It is well known that Web users create links with different intentions. However, a key question, which is not well studied, is how to categorize the links and how to quantify th...
Jie Tang, Jing Zhang, Jeffrey Xu Yu, Zi Yang, Keke...
BMCBI
2008
132views more  BMCBI 2008»
13 years 9 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
RECOMB
2004
Springer
14 years 9 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
TKDE
2008
125views more  TKDE 2008»
13 years 8 months ago
Discovering and Explaining Abnormal Nodes in Semantic Graphs
An important problem in the area of homeland security is to identify abnormal or suspicious entities in large datasets. Although there are methods from data mining and social netwo...
Shou-de Lin, Hans Chalupsky