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PARMA
2004
114views Database» more  PARMA 2004»
13 years 11 months ago
PatManQL: A Language to Manipulate Patterns and Data in Hierarchical Catalogs
Hierarchical structures and catalogs is a way to organize and enrich semantically the available information in the Web. From simple tree-like structures with syntactic constraints ...
Panagiotis Bouros, Theodore Dalamagas, Timos K. Se...
BMCBI
2006
137views more  BMCBI 2006»
13 years 10 months ago
Improving the accuracy of protein secondary structure prediction using structural alignment
Background: The accuracy of protein secondary structure prediction has steadily improved over the past 30 years. Now many secondary structure prediction methods routinely achieve ...
Scott Montgomerie, Shan Sundararaj, Warren J. Gall...
ISMB
1997
13 years 11 months ago
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
Amit Pal Singh, Douglas L. Brutlag
CIKM
2008
Springer
14 years 9 hour ago
Structural relevance: a common basis for the evaluation of structured document retrieval
This paper presents a unified framework for the evaluation of a range of structured document retrieval (SDR) approaches and tasks. The framework is based on a model of tree retrie...
Mir Sadek Ali, Mariano P. Consens, Gabriella Kazai...
SIAMSC
2011
140views more  SIAMSC 2011»
13 years 25 days ago
A Fast Parallel Algorithm for Selected Inversion of Structured Sparse Matrices with Application to 2D Electronic Structure Calcu
Abstract. An efficient parallel algorithm is presented and tested for computing selected components of H−1 where H has the structure of a Hamiltonian matrix of two-dimensional la...
Lin Lin, Chao Yang, Jianfeng Lu, Lexing Ying, Wein...