The examination of straightforwardly definable discrete structures in nucleic acids and proteins turned out to be perhaps the most important development in our present knowledge a...
WormBase (http://wormbase.org), the public database for genomics and biology of Caenorhabditis elegans, has been restructured for stronger performance and expanded for richer biol...
Erich M. Schwarz, Igor Antoshechkin, Carol Bastian...
This paper presents an extensive evaluation, on artificial datasets, of EDY, an unsupervised algorithm for automatically synthesizing a Structured Hidden Markov Model (S-HMM) from ...
Abstract. We present algorithmic, complexity and implementation results concerning real root isolation of a polynomial of degree d, with integer coefficients of bit size , using S...
Ioannis Z. Emiris, Bernard Mourrain, Elias P. Tsig...
Abstract. During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chrom...