612 search results - page 1 / 123 » Sequence Database Search Using Jumping Alignments |
GCB
2001
Springer
14 years 3 months ago
2001
Springer
BMCBI
2006
2006
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
13 years 11 months ago
Background: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequen...
JCB
2002
13 years 10 months ago
2002
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
APBC
2004
14 years 7 days ago
2004
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
IPPS
2003
IEEE
14 years 4 months ago
2003
IEEE
Progressive sequence model refinement by means of iterative searches is an effective technique for high sensitivity database searches and is currently employed in popular tools s...