An ad hoc data format is any non-standard, semi-structured data format for which robust data processing tools are not available. In this paper, we present ANNE, a new kind of mark...
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
Katerina Michalickova, Gary D. Bader, Michel Dumon...
This paper presents an extensive evaluation, on artificial datasets, of EDY, an unsupervised algorithm for automatically synthesizing a Structured Hidden Markov Model (S-HMM) from ...
Writing concurrent programs in languages that lack explicit support for concurrency can often be awkward and difficult. Haskell's monads provide a way to explicitly specify se...
This paper addresses the issue of query refinement, which involves reformulating ill-formed search queries in order to enhance relevance of search results. Query refinement typica...