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NAR
2007
152views more  NAR 2007»
13 years 8 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
SBIA
2004
Springer
14 years 1 months ago
Detecting Promising Areas by Evolutionary Clustering Search
A challenge in hybrid evolutionary algorithms is to define efficient strategies to cover all search space, applying local search only in actually promising search areas. This pape...
Alexandre César Muniz de Oliveira, Luiz Ant...
BMCBI
2011
13 years 5 days ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
WWW
2004
ACM
14 years 9 months ago
A smart hill-climbing algorithm for application server configuration
The overwhelming success of the Web as a mechanism for facilitating information retrieval and for conducting business transactions has led to an increase in the deployment of comp...
Bowei Xi, Zhen Liu, Mukund Raghavachari, Cathy H. ...
CEC
2007
IEEE
13 years 10 months ago
Hybrid optimization using DIRECT, GA, and SQP for global exploration
— As there are many good optimization algorithms each with its own characteristics, it is very difficult to choose the best method for optimization problems. Thus, it is importa...
Satoru Hiwa, Tomoyuki Hiroyasu, Mitsunori Miki