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CORR
2006
Springer
125views Education» more  CORR 2006»
15 years 4 months ago
Barriers and local minima in energy landscapes of stochastic local search
: A local search algorithm operating on an instance of a Boolean constraint satisfaction problem (in particular, k-SAT) can be viewed as a stochastic process traversing successive ...
Petteri Kaski
BMCBI
2007
102views more  BMCBI 2007»
15 years 4 months ago
qPIPSA: Relating enzymatic kinetic parameters and interaction fields
Background: The simulation of metabolic networks in quantitative systems biology requires the assignment of enzymatic kinetic parameters. Experimentally determined values are ofte...
Razif R. Gabdoulline, Matthias Stein, Rebecca C. W...
BMCBI
2007
173views more  BMCBI 2007»
15 years 4 months ago
Recursive Cluster Elimination (RCE) for classification and feature selection from gene expression data
Background: Classification studies using gene expression datasets are usually based on small numbers of samples and tens of thousands of genes. The selection of those genes that a...
Malik Yousef, Segun Jung, Louise C. Showe, Michael...
BMCBI
2007
165views more  BMCBI 2007»
15 years 4 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
CONCURRENCY
2007
125views more  CONCURRENCY 2007»
15 years 4 months ago
VLab: collaborative Grid services and portals to support computational material science
: We present the initial architecture and implementation of VLab, a Grid and Web Service-based system for enabling distributed and collaborative computational chemistry and materia...
Mehmet A. Nacar, Mehmet S. Aktas, Marlon E. Pierce...
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