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BMCBI
2005
143views more  BMCBI 2005»
15 years 3 months ago
Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries
Background: In expressed sequence tag (EST) sequencing, we are often interested in how many genes we can capture in an EST sample of a targeted size. This information provides ins...
Ji-Ping Z. Wang, Bruce G. Lindsay 0002, Liying Cui...
PODC
2004
ACM
15 years 9 months ago
Analyzing Kleinberg's (and other) small-world Models
We analyze the properties of Small-World networks, where links are much more likely to connect “neighbor nodes” than distant nodes. In particular, our analysis provides new re...
Charles U. Martel, Van Nguyen
CIVR
2006
Springer
131views Image Analysis» more  CIVR 2006»
15 years 7 months ago
Exploring the Synergy of Humans and Machines in Extreme Video Retrieval
We introduce an interface for efficient video search that exploits the human ability to quickly scan visual content, after automatic retrieval has arrange the images in expected or...
Alexander G. Hauptmann, Wei-Hao Lin, Rong Yan, Jun...
BMCBI
2010
96views more  BMCBI 2010»
15 years 4 months ago
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
Background: Chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing (ChIP-seq) or ChIP followed by genome tiling array analysis (ChIP-chip) have become standar...
Lihua J. Zhu, Claude Gazin, Nathan D. Lawson, Herv...
BMCBI
2004
174views more  BMCBI 2004»
15 years 3 months ago
SeeGH - A software tool for visualization of whole genome array comparative genomic hybridization data
Background: Array comparative genomic hybridization (CGH) is a technique which detects copy number differences in DNA segments. Complete sequencing of the human genome and the dev...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Calu...
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