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» Shape Analysis with Reference Set Relations
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BMCBI
2010
105views more  BMCBI 2010»
13 years 11 months ago
Effects of scanning sensitivity and multiple scan algorithms on microarray data quality
Background: Maximizing the utility of DNA microarray data requires optimization of data acquisition through selection of an appropriate scanner setting. To increase the amount of ...
Andrew Williams, Errol M. Thomson
SOCIALCOM
2010
13 years 8 months ago
Traffic in Social Media I: Paths Through Information Networks
Wikipedia is used every day by people all around the world, to satisfy a variety of information needs. We crosscorrelate multiple Wikipedia traffic data sets to infer various behav...
Jacob Ratkiewicz, Alessandro Flammini, Filippo Men...
BMCBI
2008
137views more  BMCBI 2008»
13 years 11 months ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...
BMCBI
2007
126views more  BMCBI 2007»
13 years 11 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
BMCBI
2011
13 years 5 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...