249 search results - page 6 / 50 » Shotgun Sequence Assembly |
CSB
2005
IEEE
14 years 2 months ago
2005
IEEE
We present a software package which can detect homozygous SNPs and indels on a eukaryotic genome scale from millions of shotgun reads. Matching seeds of a few kmer words are found...
BMCBI
2008
13 years 8 months ago
2008
Background: Analysis of complex samples with tandem mass spectrometry (MS/MS) has become routine in proteomic research. However, validation of database search results creates a bo...
CAINE
2008
13 years 10 months ago
2008
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...
BMCBI
2007
13 years 8 months ago
2007
Background: The question of how a circle or line segment becomes covered when random arcs are marked off has arisen repeatedly in bioinformatics. The number of uncovered gaps is o...
SMA
1995
ACM
14 years 4 days ago
1995
ACM
The goal of assembly sequencing is to plan a feasible series of operations to construct a product from its individual parts. Previous research has investigated assembly sequencing...