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» Similarities of Ordered Gene Lists
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IJBRA
2008
88views more  IJBRA 2008»
13 years 11 months ago
GOSAP: Gene Ontology-Based Semantic Alignment of Biological Pathways
A large number of biological pathways have been assembled in later years, and are being stored in databases. Hence, the need for methods to analyse these pathways has emerged. One ...
Jonas Gamalielsson, Björn Olsson
IJON
2006
95views more  IJON 2006»
13 years 11 months ago
Generalized relevance LVQ (GRLVQ) with correlation measures for gene expression analysis
A correlation-based similarity measure is derived for generalized relevance learning vector quantization (GRLVQ). The resulting GRLVQ-C classifier makes Pearson correlation availa...
Marc Strickert, Udo Seiffert, Nese Sreenivasulu, W...
BMCBI
2010
112views more  BMCBI 2010»
13 years 11 months ago
PhenoFam-gene set enrichment analysis through protein structural information
Background: With the current technological advances in high-throughput biology, the necessity to develop tools that help to analyse the massive amount of data being generated is e...
Maciej Paszkowski-Rogacz, Mikolaj Slabicki, M. Ter...
BMCBI
2010
118views more  BMCBI 2010»
13 years 11 months ago
svdPPCS: an effective singular value decomposition-based method for conserved and divergent co-expression gene module identifica
Background: Comparative analysis of gene expression profiling of multiple biological categories, such as different species of organisms or different kinds of tissue, promises to e...
Wensheng Zhang, Andrea Edwards, Wei Fan, Dongxiao ...
ICDM
2003
IEEE
111views Data Mining» more  ICDM 2003»
14 years 4 months ago
OP-Cluster: Clustering by Tendency in High Dimensional Space
Clustering is the process of grouping a set of objects into classes of similar objects. Because of unknownness of the hidden patterns in the data sets, the definition of similari...
Jinze Liu, Wei Wang 0010