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BMCBI
2007
143views more  BMCBI 2007»
13 years 10 months ago
RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules
Background: In recent years, RNA molecules that are not translated into proteins (ncRNAs) have drawn a great deal of attention, as they were shown to be involved in many cellular ...
Yair Horesh, Tirza Doniger, Shulamit Michaeli, Ron...
BMCBI
2006
195views more  BMCBI 2006»
13 years 10 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
BMCBI
2006
127views more  BMCBI 2006»
13 years 10 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
BMCBI
2005
121views more  BMCBI 2005»
13 years 9 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
CVPR
2008
IEEE
14 years 12 months ago
Exact inference in multi-label CRFs with higher order cliques
This paper addresses the problem of exactly inferring the maximum a posteriori solutions of discrete multi-label MRFs or CRFs with higher order cliques. We present a framework to ...
Srikumar Ramalingam, Pushmeet Kohli, Karteek Alaha...